From our LoBeS to yours

{This page is continuously under development... please check back later for more}

Preprints Tutorials Code Presentations

GitHub links for:

LoBeS - IGC - ENIGMA

More coming soon.

For a full list of publications, please see Neda's Google Scholar page.

Need to parse out your massive csv file of UK Biobank data into something manageable?

Check out Alyssa Zhu's convenient python-based data parser, presented at the 2019 OHBM.

GitHub - USC-IGC/ukbb_parserContribute to USC-IGC/ukbb_parser development by creating an account on GitHub.

The UK Biobank provides diffusion MRI ROI measures, but would you need to reprocess the images to use in ENIGMA studies?

Alyssa Zhu's technical report shows why that won't be necessary.

GitHub - USC-IGC/enigma_ukb_comparisonContribute to USC-IGC/enigma_ukb_comparison development by creating an account on GitHub.

QCing Freesurfer cortical parcellations based on the Desikan-Killiany atlas?

Let us save you some time! We did a lot of visual QC, and now Shruti Gadewar and team have trained a model from all those ratings. Gadewar et al 2021 ISBI.

GitHub - USC-IGC/FreeSurfer_Cortex_AutoQC: Region specific automatic quality assurance for MRI derived cortical segmentationsRegion specific automatic quality assurance for MRI derived cortical segmentations - GitHub - USC-IGC/FreeSurfer_Cortex_AutoQC: Region specific automatic quality assurance for MRI derived cortical ...